Methodology article
On the analysis of glycomics mass spectrometry data via the regularized area under the ROC curve
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* Corresponding author: Hao Liu haol@bcm.tmc.edu
1 Department of Statistics, University of California, Davis, Davis, CA, 95616, USA
2 Division of Biostatistics, Dan L. Duncan Cancer Center, Baylor College of Medicine, Houston, TX, 77030, USA
3 Department of Chemistry, University of California, Davis, Davis, CA, 95616, USA
4 Division of Biostatistics, University of California, Davis, Davis, CA, 95616, USA
BMC Bioinformatics 2007, 8:477 doi:10.1186/1471-2105-8-477
Published: 12 December 2007Additional files
Additional file 1:
Simulated data with different combinations of n and p used to evaluate TGDR-AUC algorithm.
Format: ZIP Size: 107KB Download file
Additional file 2:
Introduction on how to use the provided C++ code and the simulated data.
Format: DOC Size: 20KB Download file
This file can be viewed with: Microsoft Word Viewer
Additional file 3:
C++ source code for TGDR-AUC algorithm to estimate optimal parameters of λ and τ.
Format: CPP Size: 21KB Download file
Additional file 4:
C++ source code for TGDR-AUC algorithm to estimate linear combination parameters and AUC after selecting optimal λ and τ.
Format: CPP Size: 9KB Download file