Methodology article
Ranked Adjusted Rand: integrating distance and partition information in a measure of clustering agreement
-
* Corresponding author: Francisco R Pinto fpinto@fm.ul.pt
1 Instituto de Microbiologia, Instituto de Medicina Molecular, Faculdade de Medicina de Lisboa, Av. Professor Egas Moniz, 1649-028 Lisboa, Portugal
2 Grupo de Biomatemática, Instituto de Tecnologia Química e Biológica, R. Quinta Grande, 6, 2780 Oeiras, Portugal
3 Instituto de Engenharia de Sistemas e Computadores: Investigação e Desenvolvimento (INESC-ID), R. Alves Redol 9, 1000-029 Lisboa, Portugal
4 Department of Biostatistics, and Applied Mathematics, Univ. Texas, MDAnderson Cancer Center, Houston, Texas, USA
BMC Bioinformatics 2007, 8:44 doi:10.1186/1471-2105-8-44
Published: 7 February 2007Additional files
Additional File 1:
Demonstration. Pdf file with demonstration of RAR and HA equivalence in the absence of intercluster distance infromation.
Format: PDF Size: 531KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional File 2:
Comparison of simulated large clusterings. Pdf file with methods, results and interpretation of the comparison of simulated large clusterings.
Format: PDF Size: 182KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional File 3:
Biological examples. Pdf file with biological examples of the use of RAR.
Format: PDF Size: 358KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional File 4:
MATLAB toolbox. Zip file with MATLAB functions to compute RAR and related measures.
Format: ZIP Size: 4KB Download file