BMC Bioinformatics

official impact factor 3.03

Open Access Research article

Analysis on multi-domain cooperation for predicting protein-protein interactions

Rui-Sheng Wang1,2, Yong Wang3, Ling-Yun Wu3, Xiang-Sun Zhang3* and Luonan Chen2,4,5,6*

Author Affiliations

1 School of Information, Renmin University of China, Beijing 100872, China

2 Department of Electronics Information and Communication Engineering, Osaka Sangyo University, Osaka 574-8530, Japan

3 Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China

4 Institute of Systems Biology, Shanghai University, Shanghai 200444, China

5 ERATO Aihara Complexity Modelling Project, JST, Tokyo 151-0064, Japan

6 Institute of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan

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BMC Bioinformatics 2007, 8:391 doi:10.1186/1471-2105-8-391

Published: 16 October 2007

Additional files

Additional file 1:

This additional file contains the detected superdomains and cooperative domains from DIP (Tables I-III), cooperative-domain interactions verified by PDB crystal structure (Figure I), RMSE comparison results on all protein pairs (Table IV, Table V), and the additional information on the LP model.

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