Table 4

HisH4 – Ranked list of differentially changing loci on overlapping strands, generated with a 5%FDR threshold

Factor

Time Interval

Chr

Annotation

Strand

Diff change

Acetylation Summary

%FDR

GO


HisH4

00_02

1

TCFL1

AS

-1.539

-

3.43

Transcription Factor Like1

HisH4

00_02

1

TCFL1 + PIP5K1A

-2.166

-

2.70

HisH4

00_02

1

PIP5K1A

S

-2.373

-

2.72

Signal transduction

HisH4

02_08

1

TCFL1

AS

1.343

+

6.74

HisH4

02_08

1

TCFL1 + PIP5K1A

1.545

+

6.74

HisH4

02_08

1

PIP5K1A

S

NA

NA

NA


HisH4

00_02

5

GDF9

AS

NA

NA

NA

Growth differentiation factor9

HisH4

00_02

5

GDF9 + QP-C

-1.129

-

4.11

HisH4

00_02

5

QP-C

S

NA

NA

NA

Part of the mitochondrial respiratory chain


HisH4

00_02

5

FGF1

AS

-1.169

-

2.67

Fibroblast growth factor

HisH4

00_02

5

FGF1 + ARHGAP26

-1.169

-

2.67

HisH4

00_02

5

ARHGAP26

S

-1.502

-

2.67

Rho GTPase activating protein


HisH4

00_02

6

C6orf150 D24

AS

NA

NA

NA

HisH4

00_02

6

C6orf150+MTO1

-2.857

-

2.31

HisH4

00_02

6

MTO1

S

-2.623

-

2.31

HisH4

02_08

6

C6orf150

AS

NA

NA

NA

MTO1: Cellular respiration

HisH4

02_08

6

C6orf150+MTO1

1.786

+

4.04

HisH4

02_08

6

MTO1

S

1.695

+

4.04


HisH4

00_02

6

SNX3

AS

-2.600

-

2.31

Intracellular signalling cascade

HisH4

00_02

6

LACE1

S

-1.954

-

4.35

Unknown

HisH4

02_08

6

SNX3

AS

-0.849

-

4.04

HisH4

02_08

6

SNX3+LACE1

0.828

+

4.04

HisH4

02_08

6

LACE1

S

0.849

+

4.04


HisH4

00_02

7

GCC1

AS

NA

NA

NA

DNA binding protein

HisH4

00_02

7

GCC1 + ARF5

-1.574

-

1.54

HisH4

00_02

7

ARF5

AS

NA

NA

NA

Enzyme activator activity


HisH4

00_02

22

EIF4ENIF1

AS

NA

NA

NA

Translation initiation factor

HisH4

00_02

22

EIF4ENIF1 + SFI1

-1.407

-

4.95

HisH4

00_02

22

SFI1

S

NA

NA

NA

Spindle assembly associated(yeast)


HisH4

00_02

22

SYN3

AS

NA

NA

NA

Cell-cell signaling

HisH4

00_02

22

SYN3+TIMP3

-1.253

-

4.95

HisH4

00_02

22

TIMP3

S

NA

NA

NA

Enzyme Inhibitor activity


HisH4

00_02

21

GART

AS

-2.343

-

2.18

Cellular biosynthesis/catalytic activity

HisH4

00_02

21

GART+SON

-2.120

-

2.28

HisH4

00_02

21

SON

S

-1.000

-

5.03

DNA binding


HisH4

00_02

X

CXorf12

AS

-0.855

-

3.18

HisH4

00_02

X

CXorf12+IRAK1

-0.840

-

3.09

HisH4

00_02

X

IRAK1

S

-1.234

-

1.87

Interleukin-1 receptor binding


Ghosh et al. BMC Bioinformatics 2007 8:359   doi:10.1186/1471-2105-8-359

Open Data