Table 5

Sets of randomly generated structures.

Set name

Size (bases)

Number of structures


RND-50

50

1000

RND-75

75

1000

RND-100

100

100

RND-125

125

100

RND-150

150

100

RND-200

200

100

RND-450

450

100


Sets of structures generated by folding random sequences with the RNAfold function from the Vienna RNA package. Nucleotides in the sequence are assigned uniformly at random. The sets of structures of longer than 75 bases are smaller because of the amount of time required for designing these structures.

Aguirre-Hern├índez et al. BMC Bioinformatics 2007 8:34   doi:10.1186/1471-2105-8-34

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