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standard / ## Figure 8.
Scaling analysis on biologically motivated structures with different primary structure
constraints using RNA-SSD. Scaling analysis for the median expected run time of biologically motivated structures
with no primary base constraints and with bases constrained in fifty percent of random
positions and fifty percent of stems. The lines represent the polynomial that best
fits the data for structures with lengths 50, 75 and 100. The experiment with primary
structure constraints is computationally expensive, and for this reason, fewer structures
of each length were used. Note that the run times for constrained structures longer
than 100 appear below the corresponding fit line.
Aguirre-Hernández |