|
Not-N analysis-derived binary gene targets from CGH data of Campylobacter jejuni, Yersinia enterocolitica and Clostridium difficile. |
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| Bacterium |
Cladea |
Gene 1 (%) |
Gene 2 (%) |
Gene 3 (%) |
No. of Pathwaysb |
|
|
|||||
| C. jejuni |
Livestock |
Cj0818, present (85.7) |
Cj0424, present (100) |
--- |
8 |
| Non-livestock |
--- |
--- |
--- |
n/a |
|
| Y. enterocolitica |
Non-pathogenic |
Ye8081-4002, absent (100) |
--- |
--- |
0 |
| Low pathogenicity |
Ye8081-0306, absent (100) |
--- |
--- |
15 |
|
| Highly pathogenic |
Ye8081-0113, present (100) |
--- |
--- |
50 |
|
| C. difficile |
HY |
CD2669, absent (98.1) |
CD2983, present (100) |
--- |
13 |
| A-B+ |
CD2983, absent (100) |
--- |
--- |
0 |
|
| HA1 |
CD2570, present (46.4) |
CD2669, present (83.9) |
CD2983, present (100) |
0 |
|
| HA2 |
CD0265, absent (100) |
--- |
--- |
8 |
|
|
a Clades defined for Y. enterocolitica,C. jejuni and C. difficile by references [4-6] respectively. b Corresponds to the number of alternate outputs provided by Not-N analysis that are not shown in the. n/a, not applicable. | |||||
Price et al. BMC Bioinformatics 2007 8:278 doi:10.1186/1471-2105-8-278 |
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