BMC Bioinformatics

official impact factor 3.03

Open Access Highly Access Research article

The utility of MAS5 expression summary and detection call algorithms

Stuart D Pepper1, Emma K Saunders1, Laura E Edwards1, Claire L Wilson1,2 and Crispin J Miller1*

Author Affiliations

1 Cancer Research UK, Paterson Institute for Cancer Research, The University of Manchester, Christie Hospital Site, Wilmslow Road, Withington, Manchester, M20 4BX, UK

2 Epistem Ltd, 48 Grafton Street, Manchester, M13 9XX, UK

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BMC Bioinformatics 2007, 8:273 doi:10.1186/1471-2105-8-273

Published: 30 July 2007

Additional files

Additional file 1:

A comparison of fold changes found by GCRMA and MAS5 for MCF7 and MCF10a cell line data. As figure 1 in the text, but generated using GCRMA instead of RMA.

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Additional file 2:

correlations between microarray and real-time PCR data.

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Additional file 3:

Supplemental protocols. details of microarray protocols.

Format: PDF Size: 14KB Download file

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