Table 1 |
|||||
|
Functional groups found on the different chip platforms. |
|||||
|
Clust. no. |
Clust. size |
sil. ind. |
platform |
regulation |
function |
|
|
|||||
|
9 |
27 |
0.62 |
cDNA |
up |
transport |
|
13 |
10 |
0.93 |
cDNA |
up |
intracellular signaling cascade, protein transport |
|
14 |
16 |
0.82 |
cDNA |
up |
cell adhesion |
|
15 |
38 |
0.51 |
cDNA |
up |
transcription, signal transduction |
|
16 |
5 |
0.58 |
cDNA |
up |
cytoskeleton organization and biogenesis, behavior |
|
18 |
74 |
0.74 |
cDNA |
up |
transcription |
|
20 |
15 |
0.67 |
cDNA |
up |
immune response |
|
23 |
2 |
0.67 |
cDNA |
up |
catabolism |
|
28 |
22 |
0.54 |
cDNA |
up |
protein localization |
|
29 |
16 |
0.61 |
cDNA |
up |
protein modification |
|
30 |
8 |
0.54 |
cDNA |
up |
chromatin assembly or disassembly, protein complex assembly |
|
31 |
2 |
1.0 |
cDNA |
up |
mitochondrial electron transport, NADH to ubiquinone |
|
33 |
2 |
0.62 |
cDNA |
up |
fibroblast growth factor receptor signaling pathway |
|
2 |
25 |
0.79 |
cDNA |
down |
transcription |
|
4 |
23 |
0.51 |
cDNA |
down |
transport |
|
7 |
12 |
0.58 |
cDNA |
down |
immune response |
|
4 |
19 |
0.73 |
Affymetrix |
up |
metabolism, transport |
|
5 |
4 |
0.66 |
Affymetrix |
up |
blood coagulation, immune response |
|
8 |
45 |
0.54 |
Affymetrix |
up |
transcription |
|
12 |
11 |
0.92 |
Affymetrix |
up |
cell adhesion |
|
2 |
12 |
0.52 |
Affymetrix |
down |
metabolism |
|
|
|||||
|
Fröhlich et al. BMC Bioinformatics 2007 8:166 doi:10.1186/1471-2105-8-166 |
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