Software
TagSmart: analysis and visualization for yeast mutant fitness data measured by tag microarrays
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* Corresponding author: Sheng Zhong szhong@uiuc.edu
1 Department Computer Science, University of Illinois at Urbana Champaign, Urbana, IL, USA
2 Department of Bioengineering, University of Illinois at Urbana Champaign, Urbana, IL, USA
3 Department of Pathology, Virginia Mason Medical Center, 1100 Ninth Avenue, Seattle, WA, USA
4 Department of Statistics, University of Illinois at Urbana Champaign, Champaign, IL, USA
5 Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA
6 School of Electrical Engineering and Computer Science, Seoul National University, South Korea
BMC Bioinformatics 2007, 8:128 doi:10.1186/1471-2105-8-128
Published: 18 April 2007Additional files
Additional file 1:
A generic gene-deletion cassette module. Supplementary figure 1
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Additional file 2:
Summary of previous methods. Supplementary document
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Additional file 3:
Screenshot of the preprocessor module. Supplementary figure 2
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Additional file 4:
Screenshot of the computation module. Supplementary figure 3
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Additional file 5:
An example text output from TagSmart server. Supplementary figure 4
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Additional file 6:
Summary of the Cincreasin dataset. Supplementary table 1
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Additional file 7:
Summary of test results by colonial assays. Supplementary table 2
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Additional file 8:
Fold changes of the top 10 mutants sensitive to Cincreasin treatment. Supplementary figure 5
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Additional file 9:
Colonial assays for testing S.cerevisiae mutants in the presence of DMSO (control) and Cincreasin (treatment). Supplementary figure 6
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