Table 4

21 Significantly similar comparisons of the ordered gene lists with the same labels used by the Figure 3

comparison ID

studies

α.opt

# up

#down

#genes (0.03)


2_1

A B

0.06

162

154

43

2_2

A P

0.03

166

164

46

3_1

A B L

0.015

267

176

16

3_2

A B M

0.3

142

271

8

3_3

A B P

0.012

135

252

4

3_4

A B G

0.01

140

255

7

3_5

A L P

0.01

198

213

12

3_6

B M G

0.01

0

169

5

3_7

M P G

0.02

206

187

17

4_1

A B L M

0.3

350

296

4

4_2

A B L P

0.012

0

340

0

4_3

A B L G

0.01

0

235

0

4_4

A B M G

0.01

314

395

7

4_5

A B P G

0.01

448

243

3

4_6

A L M P

0.01

483

354

6

4_7

A L M G

0.01

483

354

6

4_8

A M P G

0.01

463

251

7

4_9

L M P G

0.01

232

396

6

5_1

A B L M G

0.01

0

481

3

5_2

A B M P G

0.01

666

419

2

5_3

A L M P G

0.01

466

424

2


The column "# up" records how many orders to count for up-regulated genes [66], and "# down" records how many orders to count for down-regulated genes in poor outcomes.

Yang and Sun BMC Bioinformatics 2007 8:118   doi:10.1186/1471-2105-8-118

Open Data