Research article
Gene function classification using Bayesian models with hierarchy-based priors
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* Corresponding author: Babak Shahbaba babak@stat.utoronto.ca
1 Dept. of Public Health Sciences, Biostatistics, University of Toronto, Toronto, Ontario, Canada
2 Dept. of Statistics and Dept. of Computer Science, University of Toronto, Toronto, Ontario, Canada
BMC Bioinformatics 2006, 7:448 doi:10.1186/1471-2105-7-448
Published: 12 October 2006Additional files
Additional file 1:
Comparison of direct functional annotaion of several ORFs (whos function was unknown in 2001) with predicted functions using our corMNL model. For each ORF, we provide its Blattner number, predicted hierarchical class (based on the older hierarchy of E. coli), and the corresponding class labels in the first line. The subsequent lines (in italic format) show the recent annotation of each ORF based on direct experiment. Here, SE = "Some Evidence" and NE = "No Evidence".
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