Table 2

Several datasets were used to verity the results, corresponding to different experimental setups and conditions. In each case, only the 3000 genes with highest variance were selected for further analysis. Note that this implies that the set of selected genes is (slightly) different for each dataset. For details on the preprocessing and normalization of the data see Appendix. In the following, all shown results will refer to the dataset of Spellman et al.[24]

Name

no. of points

Description

Ref.


Spellman at al.

(1998)

75

Cell Cycle

[24]

Zhu at al.

(2000)

26

Cell Cycle

[25]

Gasch at al.

(2000)

175

Various conditions

[26]


Steuer et al. BMC Bioinformatics 2006 7:380   doi:10.1186/1471-2105-7-380

Open Data