Table 4

Experimental conditions used to obtain the data set analyzed in "the ethanol response in E. coli" case study (see reference [16] for more details).

Assay characteristics


Assay

Strain

Sugar

1% EtOH in the initial medium

2% EtOH challenge


1

KO11

Glucose

NO

NO

2

LY01

Glucose

NO

NO

3

KO11

Xylose

NO

NO

4

LY01

Xylose

NO

NO

5

KO11

Glucose

YES

NO

6

LY01

Glucose

YES

NO

7

KO11

Xylose

YES

NO

8

LY01

Xylose

YES

NO

9

KO11

Glucose

NO

YES

10

LY01

Glucose

NO

YES

11

KO11

Xylose

NO

YES

12

LY01

Xylose

NO

YES


Gene expression was surveyed for 4,290 genes in a total of 12 different experimental conditions (i.e., assays).

Rollins et al. BMC Bioinformatics 2006 7:377   doi:10.1186/1471-2105-7-377

Open Data