Figure 3.

Captures of graphical result viewers. (A) BLSTCLUST. A protein-coding region on a genome is connected to coding regions for clustered proteins encoded on another genome with a line. User can select a protein-coding region on a genome, and lines connecting coding regions for members of a cluster including the selected protein are shown by green lines. (B) MegaBLAST. Identified common regions between two genomes are shown by a dot plot matrix. Green lines represent gene locations, which encode phage-related proteins in a cluster, generated with BLASTCLUST as described in text. (C) ClustalW. AP008979 is an accession number, issued by INSDC [17]. A scale bar indicates amino acid substitutions per position in the sequence.