Table 1 |
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|
Gamma and delta T cell receptor V-D-J genes. Human Homo sapiens and mouse Mus musculus T cell receptor gamma (TRG) and delta (TRD) variable (V), diversity (D), and joining (J) genes in IMGT/GeneInfo. Sources: IMGT/LIGM-DB [8,18] and EMBL/GenBank/DDBJ. |
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|
TR V(D)J loci |
TRDV |
TRAV |
TRDD |
TRDJ |
TRAJ |
TRGV |
TRGJ |
|
|
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|
Human |
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|
Chromosome |
TRA/TRD: 14q11.2 |
TRG: 7p14 |
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|
Total no. |
3 |
54 |
3 |
4 |
61 |
14 |
5 |
|
Functional |
3 |
45 |
3 |
4 |
50 |
6 |
5 |
|
ORF |
1 |
8 |
3 |
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|
Pseudogene |
8 |
3 |
5 |
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|
Locus size (kb) |
TRA/TRD: 850 |
TRG: 180 |
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|
Sources |
TRA/TRD: AE000658-AE000662 and NG_001332 |
TRG: AF159056, X08084, M12950, M12960, M16016, M12961 |
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|
Mouse |
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|
Chromosome |
TRA/TRD: 14 (19.7 cM) |
TRG: 13 (10.0 cM) |
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|
Total no. |
6 |
98 |
2 |
2 |
60 |
7 |
4 |
|
Functional |
5 |
79 |
2 |
2 |
38 |
7 |
4 |
|
ORF |
5 |
12 |
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|
Pseudogene |
1 |
14 |
10 |
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|
Locus size (kb) |
TRA/TRD: 1400 |
TRG: 200 |
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|
Sources |
TRA/TRD: AE008683-AE008686 |
TRG: AF037352 and AF021335 |
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|
|
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|
Baum et al. BMC Bioinformatics 2006 7:224 doi:10.1186/1471-2105-7-224 |
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