Table 4

Performance results for contact map prediction. Contact threshold: 8 Å. Accuracy, coverage and F1 (as %) for 8 Å contact map predictor for distance separations greater than 5, 11 and 23 amino acids.

|i - j| ≥ 6

|i - j| ≥ 12

|i - j| ≥ 24


P

R

F1

Pnc

P

R

F1

Pnc

P

R

F1

Pnc


MA

0

0

0

97.2

0

0

0

97.6

0

0

0

97.9

MA_PE

39.4

12.2

18.6

97.5

36.2

8.4

13.5

97.7

27.8

2.0

3.7

97.9

MA_SS_ACC

50.5

7.4

12.9

97.4

48.8

4.0

7.4

97.6

25.7

.2

.3

97.9

MA_SS_ACC_PE

43.3

11.3

17.9

97.5

38.9

7.2

12.1

97.7

25.5

2.2

4.1

97.9


Vullo et al. BMC Bioinformatics 2006 7:180   doi:10.1186/1471-2105-7-180

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