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BioWarehouse: a bioinformatics database warehouse toolkit

Thomas J Lee1, Yannick Pouliot1, Valerie Wagner1, Priyanka Gupta1, David WJ Stringer-Calvert2, Jessica D Tenenbaum3 and Peter D Karp1*

Author Affiliations

1 Bioinformatics Research Group, SRI International, Menlo Park, USA

2 Computer Science Laboratory, SRI International, Menlo Park, USA

3 Stanford Medical Informatics, Stanford University, Stanford, USA

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BMC Bioinformatics 2006, 7:170  doi:10.1186/1471-2105-7-170

Published: 23 March 2006

Additional files

Additional file 1:

BioWarehouse Schema ER Diagram; An entity-relationship diagram for the BioWarehouse schema.

Format: JPEG Size: 3MB Download file

Open Data

Additional file 2:

BioWarehouse Schema Definition; An SQL definition of the BioWarehouse schema.

Format: TXT Size: 99KB Download file

Open Data

Additional file 3:

Additional Queries and Timings; Additional example queries to Bio Warehouse and the time they required to execute.

Format: TXT Size: 10KB Download file

Open Data