Table 2 |
||||
|
Number and proportion of spike-in clones detected using chip 92561 as baseline |
||||
|
Clones Detected |
||||
|
|
||||
|
GeneChip Array |
S-Score |
RMA |
dChip |
MAS5 |
|
|
||||
|
92562 |
4 (0.36) |
4 (0.36) |
4 (0.36) |
4 (0.36) |
|
92563 |
8 (0.72) |
4 (0.36) |
4 (0.36) |
7 (0.64) |
|
92564 |
8 (0.72) |
0 (0.00) |
2 (0.18) |
8 (0.72) |
|
92558 |
10 (0.90) |
10 (0.90) |
8 (0.72) |
11 (1.00) |
|
92559 |
11 (1.00) |
9 (0.81) |
9 (0.81) |
11 (1.00) |
|
92560 |
9 (0.81) |
7 (0.63) |
7 (0.63) |
9 (0.81) |
|
92554 |
10 (0.90) |
8 (0.72) |
6 (0.54) |
11 (1.00) |
|
92555 |
11 (1.00) |
9 (0.81) |
9 (0.81) |
11 (1.00) |
|
92556 |
10 (0.90) |
9 (0.81) |
7 (0.63) |
11 (1.00) |
|
92557 |
10 (0.90) |
5 (0.45) |
5 (0.45) |
11 (1.00) |
|
|
||||
|
Comparison of S-Score vs. RMA, p < 0.001; vs. dChip, p < 0.001; vs. MAS5, p = 0.40 |
||||
|
Kennedy et al. BMC Bioinformatics 2006 7:154 doi:10.1186/1471-2105-7-154 |
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