Figure 5.

Running time of different alignment programs. Six alignment programs are run on the plasmodium-like synthetic sequence with q = 0.55 (see caption of tables 1 and 2), on N sequences of length l000 bp each; for N = 2–10. (The AlignM program requires at least 3 input sequences.)

Siddharthan BMC Bioinformatics 2006 7:143   doi:10.1186/1471-2105-7-143
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