Table 3

Analysis of SwissProt keywords composition in clusters calculated for the SwissProt database

K
cases
clusters
true positive
false positive
false negative
specificity
a posteriori sensitivity
a priori sensitivity

SPC
2
19161
4473
78782
4421
3373
94.7
95.9
16.1
6
79642
11643
308068
20598
261446
93.7
92.2
62.9
20
98276
6875
354980
35282
53628
91.0
86.9
72.4
64
100177
3953
331422
47215
80772
87.5
80.4
67.6
all NN
93601
3601
308433
41834
74472
88.1
80.6
62.9
TRIBE-MCL

99636
7015
364554
36783
49333
90.8
88.1
74.4
gSPC
6
80617
9755
314537
21080
23838
93.7
93.0
64.1
20
101805
2857
388434
29379
35042
93.0
91.7
79.3
64
105248
445
400100
31061
37325
92.8
91.5
81.6
all NN
105339
19
400363
31142
37391
92.8
91.5
81.7

Tetko et al. BMC Bioinformatics 2005 6:82   doi:10.1186/1471-2105-6-82