Table 5

CoPub Mapper single gene biological concept output. Output of the "Single Gene Biological Term Mapper" in which the top ten genes co-published with the prostate cancer disease-keyword are listed according to number of co-publications.

Gene name

Gene Symbols

Gene Aliases

Number of hits

log10 Relative Score

kallikrein 3, prostate specific antigen

KLK3

PSA

6628

2.55

aminopeptidase puromycin sensitive

NPEPPS

MP100, PSA

4507

2.57

androgen receptor, dihydrotestosterone receptor

DHTR, NR3C4

932

1.93

acid phosphatase, prostate

ACPP

546

2.22

gonadotropin-releasing hormone

GNRH1

GNRH, GRH, LHRH, LNRH

522

1.24

1, leutinizing-releasing hormone tumor protein p53

TP53

P53

431

0.96

B-cell CLL/lymphoma 2

BCL2

346

1.17

insulin

INS

318

0.05

epidermal growth factor, beta- urogastrone

EGF

URG

251

0.72

cyclin-dependent kinase inhibitor 1A

CDKN1A

CAP20, CDKN1, CIP1, MDA-6, P21, SDI1, WAF1

190

0.98

Alako et al. BMC Bioinformatics 2005 6:51   doi:10.1186/1471-2105-6-51