Table 1

Number of Significant Periodic Genes Identified by C-statistics, G-statistic, Intersection Set K, and Difference Set D

Cell type

Experiment

N

G

NC

NG

NK

ND


C. crescentus

bacteria

11

1474

166

44

43

123


Yeast

alpha

18

4489

1188

473

471

717

Yeast

cdc15

24

4381

1636

788

779

857

Yeast

cdc28

17

1383

292

27

27

265

Yeast

Elution

14

5766

1056

769

695

361


Human fibroblasts

N2

12

7077

1

2

1

0

Human fibroblasts

N3

12

7077

2

0

0

2


Human HeLa

Score1

12

15536

44

7

6

38

Human HeLa

Score2

26

16287

1351

154

153

1198

Human HeLa

Score3

48

41508

9702

6117

5770

3932

Human HeLa

Score4

19

40815

52

52

17

35

Human HeLa

Score5

9

35871

5

1

0

1


N: number of time points; G: number of probe sets; NC: number of significant genes picked up by C-statistic; NG: number of significant genes picked up by G-statistic; NK: number of significant periodic genes picked up by the intersection set K; ND: number of significant other periodic genes or other patterned genes picked-up by the difference set D.

Chen BMC Bioinformatics 2005 6:286   doi:10.1186/1471-2105-6-286

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