Table 2 |
|
|
Names and Consensus Sequences for Transcription Factors that Co-Regulate the Changed Genes in the GO Category 'G-protein Coupled Receptor Protein Signaling Pathway' and a Large Core of 'Response' Categories (Figure 4 and Supplementary Materials [see 8]) |
|
|
Name |
Consensus |
|
|
|
|
AP-1-IL-3 |
TGAGTCA |
|
AP-1-involucrin-H2 |
TGCCTCA |
|
ASP-CYP21 |
CTCTGTGG |
|
AlphaCE2Maf-Bfsp1 |
TGCTGAC |
|
B2_RS |
TCCTATCA |
|
CP2-consensus |
GCNMNANCMAG |
|
CPSI-B1 |
TCTCCCA |
|
EBF/Olf-1_site_2 |
TCCCNNRRGRR |
|
EBV-ZRE2 |
TGAGCAA |
|
FHX-type-A-CS |
WMARYAAAYA |
|
GAGA_box/CT_element |
AGAGARRRR |
|
GH-CSE2 |
AATAAAT |
|
GRE_CS7 |
WCTGWTCT |
|
GRE_CS8 |
AGAWCAGW |
|
GT-2B_RS |
CCAGCTG |
|
GT-IIBa-SV40 |
ACAGCTG |
|
HNF5-erk1 |
TATTTGT |
|
HiNF-Ahist |
AGAAATG |
|
IL4-P0/P1 |
ATTTTCC |
|
Initiator_CS |
CTCANTCT |
|
MEF-2-consensus |
YTWWAAATAR |
|
MEF-2_CS |
YTAWAAATAR |
|
NF-Y-consensus |
BVDCCAATVVVVD |
|
PuF_RS |
GGGTGGG |
|
RadLV-core |
TGTGGTCA |
|
Runx_CS |
AACCACA |
|
Six5_CS |
TCARRTTNC |
|
Sp1-VGF_1 |
AGGGAGG |
|
TCF-2-alpha_CS |
SAGGAAGY |
|
TCR-beta-site-6 |
AATACAA |
|
TRE.1 |
TGACTCA |
|
c-Myc_RS1 |
TCTCTTA |
|
c-mos_DS3 |
GTTTTAA |
|
delta-rpL7 |
GGAGGCTG |
|
forkhead_CS |
WAARYAAAYW |
|
p300-consensus |
GGGAGTG |
|
|
|
|
Zeeberg et al. BMC Bioinformatics 2005 6:168 doi:10.1186/1471-2105-6-168 |
|
