Table 2

Putative Tat substrates in B. subtilis. The table shows the predictions by SignalP version 3.0, regular expressions, TATFIND and TatP on B. subtilis proteins which have a putative Tat signal peptide motif, but nevertheless are secreted via the Sec-dependent pathway. Only PhoD and YwbN are secreted via the Tat secretion pathway.

Protein

Regex

SignalP

TATFIND

TatP


LipA

Yes

Yes

No

No

AbnA

Yes

Yes

No

No

BglC

Yes

Yes

No

No

BglS

Yes

Yes

No

No

LytD

Yes

Yes

No

No

OppA

Yes

Yes

No

No

PbpX

Yes

Yes

No

No

WapA

Yes

Yes

No

No

WprA

Yes

Yes

No

No

YdhF

Yes

Yes

No

No

YfkN

Yes

Yes

Yes

No

YhcR

Yes

Yes

No

No

YolA

Yes

Yes

No

No

PhoD

Yes

No

Yes

Yes

YwbN

Yes

No

Yes

Yes


Bendtsen et al. BMC Bioinformatics 2005 6:167   doi:10.1186/1471-2105-6-167

Open Data