Table 2

Sensitivity (sens) and Specificity (spec) (in %) on Park and Kanehisa's dataset [21]. First two columns show results from Park and Kanehisa's algorithm [21] obtained by 5-fold crossvalidation. The next column shows results from Chou and Cai's work [8] obtained using leave one out test. The last set of results are from our algorithm obtained using 5-fold and 10-fold crossvalidation.
Subcellular
 P & K
 P & K
 Chou Cai
 pSLIP
Location
 5-fold
 5-fold
 LOO-CV
 5-fold
 10-fold

sens
 sens
 sens
 spec
 sens
 spec
 sens
Chloroplast
 72.3
 70.3
 93.9
 89.9
 84.8
 93.5
 92.4
Cytoplasmic
 72.2
 73.9
 91.5
 86.2
 84.1
 91.6
 87.7
Cytoskeleton
 58.5
 59.8
 80.0
 -
 -
 -
 -
ER
 46.5
 39.0
 90.3
 -
 -
 -
 -
Extracellular
 78.0
 77.1
 90.0
 96.3
 92.0
 98.4
 93.7
Golgi Apparatus
 14.6
 -
 76.6
 -
 -
 -
 -
Lysosomal
 61.8
 62.4
 92.5
 -
 -
 -
 -
Mitochondrial
 57.4
 53.5
 83.6
 75.9
 86.8
 85.7
 93.5
Nuclear
 89.6
 89.0
 95.3
 89.4
 90.4
 93.1
 93.1
Peroxisomal
 25.6
 -
 82.4
 -
 -
 -
 -
Plasma Membrane
 92.2
 91.9
 95.0
 95.1
 94.1
 95.0
 97.0
Vacuolar
 25.0
 -
 66.7
 -
 -
 -
 -
TA
 78.2
 79.1
 92.4
 89.5
 93.1
LA
 57.9
 68.5
 -
 88.7
 92.9

Sarda et al. BMC Bioinformatics 2005 6:152   doi:10.1186/1471-2105-6-152