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Differences found between AutoFACT and PEDANT annotations for Saccharomyces cerevisiae |
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| ID |
PEDANT Annotation |
AutoFACT Annotation |
AutoFACT Score |
AutoFACT E-value |
AutoFACT % Identity |
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| yal048c |
vacuolar aspartic protease |
GON1; possible rho-like GTPase involved in secretory vesicle transport |
1724 |
0.0 |
50% (360/718) |
| yhr064c |
SSZ1 – regulator protein involved in pleiotropic drug resistance |
multi-domain protein |
651 |
3.00E-68 |
28% (154/539) |
| yhr046c |
INM1 – inositol-1(or 4)-monophosphatase |
*Protein qutG related cluster |
378 |
4.00E-35 |
31% (99/310) |
| yhr143w |
DSE2 – glucan 1,3-beta-glucosidase activity |
multi-domain protein |
229 |
2.00E-19 |
25% (70/278) |
| yhl043w |
ECM34 – involved in cell wall biogenesis and architecture |
DUP domain-containing protein |
205 |
5.00E-17 |
36% (26/72) |
| yal047c |
SPC72 – Stu2p Interactant |
*Repeat organellar protein related cluster |
160 |
2.00E-09 |
20% (124/620) |
| yhr167w |
THP2 – subunit of the THO complex, which appears to functionally connect transcription elongation with mitotic recombination |
*Myosin heavy chain related cluster |
129 |
2.00E-06 |
24% (51/210) |
| yhr154w |
RTT107 – Establishes Silent Chromatin |
BRCT domain-containing protein |
118 |
4.00E-06 |
28% (24/83) |
| yhl020c |
OPI1 – negative regulator of phospholipid biosynthesis pathway |
multi-domain protein |
114 |
5.00E-06 |
24% (30/123) |
| yhr196w |
UTP9 – U3 snoRNP protein |
Borrelia_orfA domain-containing protein |
104 |
1.00E-04 |
19% (75/376) |
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Annotations in bold are the same as the original annotations found in the Saccharomyces Genome Database. AutoFACT annotations marked with an asterisk (*) are considered false positives. | |||||
Koski et al. BMC Bioinformatics 2005 6:151 doi:10.1186/1471-2105-6-151 |
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