BMC Bioinformatics

official impact factor 3.03

Open Access Methodology article

Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes

Hongying Jiang1, Youping Deng2, Huann-Sheng Chen3, Lin Tao3, Qiuying Sha3, Jun Chen2, Chung-Jui Tsai1 and Shuanglin Zhang3*

  • * Corresponding author: Shuanglin Zhang shuzhang@mtu.edu

  • † Equal contributors

Author Affiliations

1 Plant Biotechnology Research Center, School of Forest Resources & Environmental Science, Michigan Technological University, 1400 Townsend Dr., Houghton, MI 49931, USA

2 Division of Biology, Kansas State University, Manhattan, KS 66506, USA

3 Department of Mathematical Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI 49931, USA

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BMC Bioinformatics 2004, 5:81 doi:10.1186/1471-2105-5-81

Published: 24 June 2004

Additional files

Additional File 1:

Selected marker genes to separate AD from NL samples using GSRF and GSFLD.

Format: XLS Size: 21KB Download file

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Additional File 2:

Selected survival-related genes using univariate Cox proportional hazard regression model and PCA.

Format: XLS Size: 24KB Download file

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Additional File 3:

The C program to integrate 2 data sets. It contains 5 files: integrate.exe, README4integration.txt, pparameter1.txt, data1.txt, and data2.txt (the last two are example data sets).

Format: ZIP Size: 95KB Download file

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Additional File 4:

The C program to run GSFLD test. It contains 3 files: gsfld.exe, README4gsfld.txt, and inputdata.txt (a small example data set). Click here to download the above files: http://aspendb.mtu.edu/project/ad/paper1_download.html webcite

Format: ZIP Size: 68KB Download file

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