Table 2

Accuracy percentiles and characteristics of models from 50 cross-validation samples of DS1, m/z > 0

Algorithm

Test Set Accuracy 25th, 75th Percentile

Median # Clusters

Median # Markers

Proportion of Perfect Chromosomes


GA(P1 = 0, p2 = 0)

.96, .98

12

15.5

1.0

GA(0, .001)

.95, .99

12.5

11

1.0

GA(0, .002)

.95, .98

12.5

10

1.0

GA(.002, 0)

.96, .98

7

16

.98

GA(.002, .001)

.97, .98

7

12.5

1.0

GA(.002, .002)

.96, .99

8.5

9

.98

GA(.005, 0)

.96, .98

6

15

.92

GA(.005, .001)

.96, .98

5

11

.92

GA(.005, .002)

.96, .99

6

8

.94

GA(.008, 0)

.96, .98

3

15

.72

GA(.008, .001)

.97, .99

4

9

.88

GA(.008, .002)

.97, .99

4

8

.84

Best GA

.97, .99

6

12

.94

Boosting

.99, 1.0

NA

NA

NA

PAM

.93, .97

NA

NA

NA


Jeffries BMC Bioinformatics 2004 5:180   doi:10.1186/1471-2105-5-180

Open Data