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Number of Genes with Significant Differences between Tumor and Normal Class in Various Cancer Types under the PPST and ABA tests and the parametric t-test (for comparison) |
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| α = 0.1 |
α = 0.05 |
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| Data Set |
PPST |
ABA test (ABA/BAB) |
PPST |
ABA test (ABA/BAB) |
parametric tα = 0.05 ** |
|
|
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| breast7 |
572 |
40/5 |
326 |
28/49 |
313 |
| melanoma15 |
662 |
60/202 |
312 |
38/133 |
347 |
| colon45 |
1788 |
55/153 |
1558 |
46/55 |
1378 |
| ovarian16 |
3344 |
253/63 |
2060 |
189/22 |
1813 |
| lymphoma18 |
2077 |
286/42 |
1114 |
194/30 |
1370 |
| lung19 |
614 |
40/3 |
506 |
35/3 |
389 |
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*A = tumor sample group, B = normal sample group **pooled variance t | |||||
Lyons-Weiler et al. BMC Bioinformatics 2004 5:110 doi:10.1186/1471-2105-5-110 |
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