Table 1 

True and false positive rates for selected Rvalues. 

Rvalue 
TP rate 
FP rate 


0.1 
0.971 
0 
2 
0.980 
2.3e6 
10 
0.984 
3.0e5 
50 
0.987 
3.1e4 
150 
0.991 
8.7e4 
500 
0.995 
2.8e3 
10000 
0.999 
0.059 


True and false positive rates averaged over 10 crossvalidations for selected Rvalues in the case of the three branches, fourth order E. coli model. The FP rate is measured as the average fraction of ORFs (with lengths greater than or equal to 20 codons) in one megabase of doublestranded random sequence scoring lower than the given Rvalue. The TP rate is measured as the average fraction of ORFs in data set T scoring lower than the given Rvalue 

Larsen and Krogh BMC Bioinformatics 2003 4:21 doi:10.1186/14712105421 