Figure 5.

Overlap Score Distributions of Pre HTMS and AllYeast interaction sets with MIPS Complex Benchmark Optimized MCODE Parameter Sets Figure legend: The number of MCODE predicted complexes in the pre-large scale mass spectrometry (Pre HTMS) and AllYeast protein-protein interaction sets with a given overlap score threshold compared to the MIPS benchmark complex set is shown. The majority of predicted complexes have an overlap score of zero meaning that they had no overlap with the catalogue of known MIPS protein complexes.

Bader and Hogue BMC Bioinformatics 2003 4:2   doi:10.1186/1471-2105-4-2
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