Table 4

Sparse modules in U and T KOG categories for Saccharomyces cerevisia PPI network

KOG ID

Sparse module example

Enriched genes

Enriched GO Term

GO Level

p-value


U

YDR179C, YNL287W, YDL216C YCR099C, YIL004C,YAL026C YLR268W, YLR093C, YPR163C YPR148C, YOL064C, YOL117W YGL084C, YLR031W, YIL076W YPL179W, YKL191W, YPL010W

YOL117W, YDR179C, YDL216C

protein deneddylation

[+8, 0]

2.01e-5


T

YJL092W, YDR490C, YOR231W YJL005W, YPL074W, YPL083C YNL323W,YOL100W

YDR490C, YOL100W, YNL323W, YJL005W, YOR231W

signal transduction

[+3, -1]

6.09e-5


T

YDR076W, YDL059C, YJL173C YPL164C, YER171W, YPL026C YCR079W, YPL150W, YHR169W YJR062C

YDL059C, YPL026C, YER171W, YPL164C, YJL173C, YDR076W

response to endogenous stimulus

[+2, -1]

4.77e-5


Wang and Qian BMC Bioinformatics 2013 14(Suppl 2):S23   doi:10.1186/1471-2105-14-S2-S23

Open Data