Table 4

Performance of CoNVEX against other methods.

Method

True positives

False positives


CoNVEX

9/10

10/15850


Var Scan2

6/7

4983/15283


ExomeCopy

0/10

9/15850


CONTRA

0/10

0/15847


Table shows the number of exons (numerator) that have been identified as true positives and false positives by each method. The denominator shows the total true positives (2ndcolumn) or true negatives (3rdcolumn). Total number of true negatives differ among methods due to filtering and quality control done by each of them.

Amarasinghe et al. BMC Bioinformatics 2013 14(Suppl 2):S2   doi:10.1186/1471-2105-14-S2-S2

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