A demonstration of a cavity formed by Val119, Val150, Thr152 and Arg208. Top: In the temporal scatterplot we see that this cavity is frequently present over the entire temporal domain. Middle: The chemical properties are very stable as well, where the dominant ones are hydrophobicity and polarity. We can also note a small positively charged cavity characteristic. Bottom: A close-up on the cavity in five consecutive time steps (465,46,467,468 and 469). We can also observe the actual chemical properties directly in the vicinity of the cavity surface.
Parulek et al. BMC Bioinformatics 2013 14(Suppl 19):S4 doi:10.1186/1471-2105-14-S19-S4