Table 1

EST libraries and sequence data available at SymGRASS.

Library Id

Tissue sample

Total Reads


SC34

Apical meristem and neighboring tissue (immature plants)

13,325

SC24

Apical meristem and neighboring tissue (mature plants)

10,813

SC19

Developing inflorescence 1 cm long

15,277

SC39

Developing inflorescence base 5 cm long

10,692

SC27

Developing inflorescence and rhachis 10 cm long

4,629

SC22

Developed inflorescence and rhachis 20 cm long

13,912

SC43

Developed inflorescence 20 cm long without rhachis

8,006

SC8

Developing seeds

17,012

SC31

Etiolated leaves from in vitro grown seedlings

4,543

SC37

First apical stalk internode of adult plants

6,906

SC5

First to third meristem internodes

1,078

SC25

Fourth apical stalk internode of adult plants

8,672

SC17

Sixth to eleventh internodes

7,234

SC35

Germinating sett roots

68

SC36

Lateral buds from field grown adult plants

5,904

SC6

Lateral buds from greenhouse grown adult plants

8,947

SC4

Leaf roll from field grown adult plants

15,141

SC3

Leaf roll including apex

3,581

SC9

Leaf whorl

4,316

SC1

Mature leaf tissue

6,867

SC23

Pool of calli exposed to low (4 °C) and high (37 °C) temperatures

8,978

SC10

Root

10,152

SC12

Root apex from adult plants

7,421

SC2

Root tips 0,3 cm long from adult plants

17,770

SC28

Shoot-root transition zone from young plants

7,839

SC18

Shoot-root transition zone from adult plants

12,806

SC45

Seedlings inoculated with Glucoacetobacter diazotroficans

14,629

SC11

Seedlings inoculated with Herbaspirillum rubrisubalbicans

9,684

SC21

Stem

11,379

SC41

Stalk bark from adult plants

13,151

SC16

Pool of tissues

2,490


Total

283,222


Belarmino et al. BMC Bioinformatics 2013 14(Suppl 1):S2   doi:10.1186/1471-2105-14-S1-S2

Open Data