Table 8

Alignments results for different read lengths and error rate conditions
BWA GASSST FPGA
2% err 4% err 6% err 2% err 4% err 6% err 2% err 4% err 6% err
76 bp # of aln 964,053 831,634 643,670 990,842 966,001 863,848 993,057 971,367 873,804
true aln 950,293 819,522 634,386 976,482 951,587 851,162 977,722 956,785 861,025
100 bp # of aln 964,005 835,099 655,336 990,970 976,574 905,030 993,701 988,114 944,693
true aln 951,425 823,850 646,444 977,781 963,265 892,342 979,536 974,243 931,325

Chen et al.

Chen et al. BMC Bioinformatics 2013 14:67   doi:10.1186/1471-2105-14-67

Open Data