Table 4

Alignment runtime comparison for one million reads
4% error rate 6% error rate 8% error rate
GASSST 55 s 46 s 37 s
Align Core 1.6 s 1.47 s 1.31 s
Speedup 34 31.3 28

Chen et al.

Chen et al. BMC Bioinformatics 2013 14:67   doi:10.1186/1471-2105-14-67

Open Data