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cudaMap: a GPU accelerated program for gene expression connectivity mapping

Darragh G McArt, Peter Bankhead, Philip D Dunne, Manuel Salto-Tellez, Peter Hamilton and Shu-Dong Zhang*

Author Affiliations

Centre for Cancer Research and Cell Biology (CCRCB), Queen’s University Belfast (QUB), Belfast, Northern Ireland, UK

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BMC Bioinformatics 2013, 14:305  doi:10.1186/1471-2105-14-305

Published: 11 October 2013

Additional files

Additional file 1:

Pseudocode for the key algorithms used in sscMap and cudaMap.

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