Table 1

Number and percentage of identifiers and names mapped between different resources for cell, gene and protein, and biological process and molecular function concepts
From To Solution # Identifiers Mapped identifiers # Concept names Mapped concept names
Gene and protein Uniprot Entrez Gene Neji 51118 100% 13239 100%
Whatizit 123136 53% 18079 95%
Uniprot Protein Ontology Neji 51118 95% 13239 99%
Whatizit 123136 22% 18079 78%
Cell UMLS Cell Ontology Neji 8390 64% 5926 91%
Biological process and molecular function* UMLS Gene Ontology Neji 6079 28% 5377 32%

*Only concept names with UMLS identifiers are considered.

Campos et al.

Campos et al. BMC Bioinformatics 2013 14:281   doi:10.1186/1471-2105-14-281

Open Data