Table 10

Number of SNVs called by SAMtools with different cutoffs of genotype quality
Cutoffs SNVs dbSNPs Non-dbSNPs
≥ 4 (all) 570 398 172
≥ 5 567 397 170
≥ 6 565 396 169
≥ 7 564 395 169
≥ 8 563 395 168
≥ 9 559 393 166
≥ 10 558 393 165

Yu and Sun

Yu and Sun BMC Bioinformatics 2013 14:274   doi:10.1186/1471-2105-14-274

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