Table 2

Summary of rotamer recovery for template sequences modeled using the HASP server
Amino acid Total Rotamers recovered Recovery rate ± stda
D 295 147 0.50 ± 0.11
E 379 152 0.40 ± 0.13
F 207 185 0.89 ± 0.11
H 154 116 0.75 ± 0.12
I 344 210 0.62 ± 0.10
K 355 124 0.35 ± 0.13
L 446 333 0.75 ± 0.08
M 96 35 0.37 ± 0.18
N 491 223 0.45 ± 0.11
Q 193 77 0.41 ± 0.12
R 233 86 0.37 ± 0.11
S 408 281 0.69 ± 0.14
T 398 293 0.73 ± 0.11
V 320 270 0.84 ± 0.07
W 109 105 0.96 ± 0.09
Y 244 231 0.95 ± 0.06

aThe standard deviation (std) of the recovery rate was calculated over the set of individual recovery rates for each template sequence modeled (n = 12).

Ambroggio et al.

Ambroggio et al. BMC Bioinformatics 2013 14:197   doi:10.1186/1471-2105-14-197

Open Data