Table 5

Comparison of two methods for predicting human proteins interacting with HPV proteins

Test set

Our representation

Shen's representation


SN (%)

SP (%)

AC (%)

SN (%)

SP (%)

AC (%)


1

86.5

88.5

87.5

69.2

84.6

76.9

2

73.1

88.5

80.8

69.2

84.6

76.9

3

76.9

86.5

81.7

78.8

82.7

80.8


Average

78.8

87.8

83.3

72.4

83.9

78.2


Comparison of our representation method with the method by Shen et al. [5] in terms of sensitivity (SN), specificity (SP) and accuracy (AC) with the HPV data.

Cui et al. BMC Bioinformatics 2012 13(Suppl 7):S5   doi:10.1186/1471-2105-13-S7-S5

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