Table 1

Comparison of Genovar with previously reported CNV analysis tools

Plat-

form

Module

CGHPRO

VAMP

ISACGH

MD-SeeGH

SIGMA2

CGcgh

CGHweb

CHESS

SnoopCGH

CNA-Reporter

SEURAT

Wavi-CGH

FISH Oracle

CNVAS

GENOVAR


Year

2005

2006

2007

2008

2008

2008

2008

2009

2009

2010

2010

2010

2011

2011

2011


CNV detection

O

O

O

O

O

O

O

O

O

O

O

O

O

CGH

CNV visualization

O

O

O

O

O

O

O

O

O

O

O

O

O

O

O

CNV quality control

O

O

Annotation

O

O

O

O

O

O

O

O

O

O

O

O

O

O


CNV detection

O

NGS

CNV visualization

O

CNV quality control

O

Annotation


Jung et al. BMC Bioinformatics 2012 13(Suppl 7):S12   doi:10.1186/1471-2105-13-S7-S12

Open Data