PyMod integrated tools flowchart. The workflow shows how the separate tools are integrated in PyMod. Each tool must be considered as standalone (e.g., it's possible to perform a sequence alignment task without searching in the database as a mandatory step).
Bramucci et al. BMC Bioinformatics 2012 13(Suppl 4):S2 doi:10.1186/1471-2105-13-S4-S2