Table 3

UniProtKB/Swiss-Prot database: percentage of protein sequences that contain at least a tandem repeat with length ≥ 40

Metric

z = 1

z = 3

z = 5


BLOSUM 90

4.3

4.9

4.9

BLOSUM 70

4.9

5.5

5.4

BLOSUM 50

4.9

5.7

5.7

Edit

1.8

-

-


Pellegrini et al. BMC Bioinformatics 2012 13(Suppl 3):S8   doi:10.1186/1471-2105-13-S3-S8

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