Table 2

A Comparison of Human Pathways in IPAD against Several Common Pathway Data Sources

BioCarta[4]

KEGG[5]

NCI-Nature curated[6]

Reactome[7]

IPAD


Pathway coverage

310

247

222

1177

1956

Molecule coverage

1372

9238

2561

5668

11663

Last Updated

2010

Mar 2012

July 2010

Jan 2011

Mar 2012

Curation Type

Manual

Manual

Manual

Manual

Integrated

Disease Association

No

Yes

No

No

Yes

Drug Association

No

Yes

No

No

Yes

Organ Specificity Association

No

No

No

No

Yes

Inter-associations Quantitative

No

No

No

No

Yes

Enrichment Score Quantitative

No

No

No

No

Yes

Similarity

No

No

No

No

Yes


Zhang and Drabier BMC Bioinformatics 2012 13(Suppl 15):S7   doi:10.1186/1471-2105-13-S15-S7

Open Data