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Resolution: standard / high Figure 3.
The Human Magnesome output. A typical output of the human magnesome site (BAR-hMG). The test sequence inherits,
after cluster based HMM alignment to the corresponding templates (listed in the inset),
five binding residues (K 21, S 22, T 40, D 63 and T 64). The residues are color coded
depending on the BLOSUM 62 alignment scoring matrix. From the result page is also
possible to retrieve the matching BAR+ cluster page and the corresponding UniProtKB
page of the target entry. The green color in the output indicates residues identical
to the original template/s. Similar residues are highlighted in yellow. The yellow
star indicates that the protein is located in a cluster where Mg binds to PDB templates
(listed) in a documented structural way. Cluster HMM can be downloaded.
Piovesan et al. BMC Bioinformatics 2012 13(Suppl 14):S10 doi:10.1186/1471-2105-13-S14-S10 |