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Resolution: standard / high Figure 8.
Differential distribution of bacterial taxa that discriminate maximum pain levels
in patients with recurrent abdominal pain. The distribution of bacterial taxa in patients with recurrent abdominal pain was
used to classify the subjects based on the maximum levels of abdominal pain. Bacterial
taxa (specified in leftmost column) were analyzed using randomForest and confirmed
by feature selection using Boruta. The list is sorted first by Mann-Whitney U score
followed by the largest disparity in medians for each group. Taxa represent the lowest
taxonomic depth (Genus) that is labeled by RDP Classifier (at ≥ 80% bootstrap cut
off). The degree of abdominal pain was differentiated by the maximum level of pain
recorded during a 14-day period. Red rectangles display the HM (high- medium level)
maximum abdominal pain phenotype. Light blue rectangles display the L0 (low-zero level)
maximum abdominal pain phenotype. Boxes represent the first quartile, median, and
third quartile of the distribution of OTUs for each pain group. Empty circles represent
outliers that are 1.5x greater than the respective interquartile ranges. Shown are
OTUs with increased levels of maximum pain in children with HM versus L0 maximum abdominal
pain phenotypes.
Riehle et al. BMC Bioinformatics 2012 13(Suppl 13):S11 doi:10.1186/1471-2105-13-S13-S11 |