Genboree Microbiome Toolset Dataflow. The flow begins by producing quality filtered sequences from the 16S rRNA sequences and the sample metadata. These can be passed to the taxonomic classification pipeline for taxonomic abundance reports or to the multi-step OTU picking pipeline for alpha diversity, beta diversity, classification using supervised machine learning, and feature selection.
Riehle et al. BMC Bioinformatics 2012 13(Suppl 13):S11 doi:10.1186/1471-2105-13-S13-S11